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LOC105125955 gibberellin 2-beta-dioxygenase 8 [ Populus euphratica (Euphrates poplar) ]

Gene ID: 105125955, updated on 22-Oct-2023

Summary

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Gene symbol
LOC105125955
Gene description
gibberellin 2-beta-dioxygenase 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus euphratica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current PopEup_1.0 (GCF_000495115.1) Unplaced Scaffold NW_011499865.1 (1160174..1165943, complement)

NW_011499865.1Genomic Context describing neighboring genes Neighboring gene asparagine synthetase [glutamine-hydrolyzing] 1 Neighboring gene protein PMR5-like Neighboring gene U6 snRNA-associated Sm-like protein LSm8 Neighboring gene U6 snRNA-associated Sm-like protein LSm5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011499865.1 Unplaced Scaffold Reference PopEup_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gibberellin 2-beta-dioxygenase 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus euphratica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PopEup_1.0 Primary Assembly

Genomic

  1. NW_011499865.1 Reference PopEup_1.0 Primary Assembly

    Range
    1160174..1165943 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011026636.1 → XP_011024938.1  gibberellin 2-beta-dioxygenase 8

    See identical proteins and their annotated locations for XP_011024938.1

    Conserved Domains (3) summary
    PLN02984
    Location:4 → 335
    PLN02984; oxidoreductase, 2OG-Fe(II) oxygenase family protein
    pfam03171
    Location:202 → 292
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
    pfam14226
    Location:43 → 135
    DIOX_N; non-haem dioxygenase in morphine synthesis N-terminal

  2. XM_011026637.1 → XP_011024939.1  gibberellin 2-beta-dioxygenase 8

    See identical proteins and their annotated locations for XP_011024939.1

    Conserved Domains (3) summary
    PLN02984
    Location:4 → 335
    PLN02984; oxidoreductase, 2OG-Fe(II) oxygenase family protein
    pfam03171
    Location:202 → 292
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
    pfam14226
    Location:43 → 135
    DIOX_N; non-haem dioxygenase in morphine synthesis N-terminal
Nucleotide Protein
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