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LOC105032402 GTP cyclohydrolase 1 [ Elaeis guineensis (African oil palm) ]

Gene ID: 105032402, updated on 21-Dec-2023

Summary

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Gene symbol
LOC105032402
Gene description
GTP cyclohydrolase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Elaeis guineensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Genomic context

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See LOC105032402 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current EG5 (GCF_000442705.1) Unplaced Scaffold NW_011550954.1 (495990..507826, complement)

NW_011550954.1Genomic Context describing neighboring genes Neighboring gene glycine-rich RNA-binding protein 2, mitochondrial Neighboring gene UDP-glucuronate 4-epimerase 6 Neighboring gene probable acyl-activating enzyme 16, chloroplastic Neighboring gene probable DNA replication complex GINS protein PSF3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011550954 Unplaced Scaffold Reference EG5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTP cyclohydrolase I activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tetrahydrobiopterin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tetrahydrofolate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GTP cyclohydrolase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Elaeis guineensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EG5 Primary Assembly

Genomic

  1. NW_011550954.1 Reference EG5 Primary Assembly

    Range
    495990..507826 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010906847.3 → XP_010905149.1  GTP cyclohydrolase 1

    UniProtKB/TrEMBL
    A0A6I9Q8U4
    Conserved Domains (2) summary
    PLN02531
    Location:1 → 495
    PLN02531; GTP cyclohydrolase I
    cl00263
    Location:43 → 195
    TFold; Tunnelling fold (T-fold). The five known T-folds are found in five different enzymes with different functions: dihydroneopterin-triphosphate epimerase (DHNTPE), dihydroneopterin aldolase (DHNA) , GTP cyclohydrolase I (GTPCH-1), 6-pyrovoyl ...
Nucleotide Protein
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Molecular Biology Databases