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hnrnpa1b heterogeneous nuclear ribonucleoprotein A1b [ Esox lucius (northern pike) ]

Gene ID: 105013623, updated on 13-Mar-2024

Summary

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Gene symbol
hnrnpa1b
Gene description
heterogeneous nuclear ribonucleoprotein A1b
See related
EnsemblRapid:ENSELUG00000007372
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Also known as
hnrnpa1
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 12
Exon count:
11
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 12 NC_047580.1 (28593122..28596542, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG12 NC_025979.4 (8722621..8727162)

Chromosome 12 - NC_047580.1Genomic Context describing neighboring genes Neighboring gene COPI coat complex subunit zeta 1 Neighboring gene nuclear factor, erythroid 2 Neighboring gene chromobox homolog 5 (HP1 alpha homolog, Drosophila) Neighboring gene homeobox C1a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heterogeneous nuclear ribonucleoprotein A1b
Names
heterogeneous nuclear ribonucleoprotein A1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047580.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    28593122..28596542 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034295784.1 → XP_034151675.1  heterogeneous nuclear ribonucleoprotein A1b isoform X7

    Conserved Domains (2) summary
    cd12761
    Location:11 → 91
    RRM1_hnRNPA1; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein A1 (hnRNP A1) and similar proteins
    cl17169
    Location:104 → 183
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. XM_034295781.1 → XP_034151672.1  heterogeneous nuclear ribonucleoprotein A1b isoform X4

    Conserved Domains (2) summary
    cd12578
    Location:14 → 91
    RRM1_hnRNPA_like; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein A subfamily
    cl17169
    Location:104 → 183
    RRM_SF; RNA recognition motif (RRM) superfamily

  3. XM_034295779.1 → XP_034151670.1  heterogeneous nuclear ribonucleoprotein A1b isoform X2

    Conserved Domains (2) summary
    cd12761
    Location:11 → 91
    RRM1_hnRNPA1; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein A1 (hnRNP A1) and similar proteins
    cl17169
    Location:104 → 183
    RRM_SF; RNA recognition motif (RRM) superfamily

  4. XM_034295782.1 → XP_034151673.1  heterogeneous nuclear ribonucleoprotein A1b isoform X5

    Conserved Domains (2) summary
    cd12761
    Location:11 → 91
    RRM1_hnRNPA1; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein A1 (hnRNP A1) and similar proteins
    cl17169
    Location:104 → 183
    RRM_SF; RNA recognition motif (RRM) superfamily

  5. XM_034295787.1 → XP_034151678.1  heterogeneous nuclear ribonucleoprotein A1b isoform X10

    Conserved Domains (1) summary
    cl17169
    Location:11 → 91
    RRM_SF; RNA recognition motif (RRM) superfamily

  6. XM_034295780.1 → XP_034151671.1  heterogeneous nuclear ribonucleoprotein A1b isoform X3

    Conserved Domains (2) summary
    cd12578
    Location:14 → 91
    RRM1_hnRNPA_like; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein A subfamily
    cl17169
    Location:104 → 183
    RRM_SF; RNA recognition motif (RRM) superfamily

  7. XM_034295786.1 → XP_034151677.1  heterogeneous nuclear ribonucleoprotein A1b isoform X9

    Conserved Domains (1) summary
    cl17169
    Location:11 → 91
    RRM_SF; RNA recognition motif (RRM) superfamily

  8. XM_034295783.1 → XP_034151674.1  heterogeneous nuclear ribonucleoprotein A1b isoform X6

    Conserved Domains (2) summary
    cd12761
    Location:11 → 91
    RRM1_hnRNPA1; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein A1 (hnRNP A1) and similar proteins
    cl17169
    Location:104 → 183
    RRM_SF; RNA recognition motif (RRM) superfamily

  9. XM_034295785.1 → XP_034151676.1  heterogeneous nuclear ribonucleoprotein A1b isoform X8

    Related
    ENSELUP00000030232.3, ENSELUT00000008849.3
    Conserved Domains (2) summary
    cd12761
    Location:11 → 91
    RRM1_hnRNPA1; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein A1 (hnRNP A1) and similar proteins
    cl17169
    Location:104 → 183
    RRM_SF; RNA recognition motif (RRM) superfamily

  10. XM_034295778.1 → XP_034151669.1  heterogeneous nuclear ribonucleoprotein A1b isoform X1

    Conserved Domains (2) summary
    cd12761
    Location:11 → 91
    RRM1_hnRNPA1; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein A1 (hnRNP A1) and similar proteins
    cl17169
    Location:104 → 183
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
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