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pnn pinin, desmosome associated protein [ Notothenia coriiceps (black rockcod) ]

Gene ID: 104954923, updated on 12-Mar-2024

Summary

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Gene symbol
pnn
Gene description
pinin, desmosome associated protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Notothenia coriiceps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011356933.1 (10352..12705, complement)

NW_011356933.1Genomic Context describing neighboring genes Neighboring gene MIA SH3 domain ER export factor 2 Neighboring gene gem (nuclear organelle) associated protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011356933.1 Unplaced Scaffold Reference NC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pinin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NC01 Primary Assembly

Genomic

  1. NW_011356933.1 Reference NC01 Primary Assembly

    Range
    10352..12705 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010782126.1 → XP_010780428.1  pinin

    UniProtKB/TrEMBL
    A0A6I9P057
    Conserved Domains (2) summary
    pfam04929
    Location:235 → 349
    Herpes_DNAp_acc; Herpes DNA replication accessory factor
    cl23720
    Location:18 → 61
    RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
Nucleotide Protein
Heading Accession and Version

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