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LOC104884136 3-isopropylmalate dehydratase small subunit 1 [ Beta vulgaris subsp. vulgaris ]

Gene ID: 104884136, updated on 9-Nov-2023

Summary

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Gene symbol
LOC104884136
Gene description
3-isopropylmalate dehydratase small subunit 1
Locus tag
BVRB_006300
Gene type
protein coding
RefSeq status
MODEL
Organism
Beta vulgaris subsp. vulgaris (sub-species: vulgaris)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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Genomic context

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Location:
chromosome: 5
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_06 current EL10.2 (GCF_026745355.1) 5 NC_079206.1 (10571326..10576780)
102 previous assembly EL10_1.0 (GCF_002917755.1) 5 NC_064021.1 (48736695..48742145, complement)

Chromosome 5 - NC_079206.1Genomic Context describing neighboring genes Neighboring gene 3-isopropylmalate dehydratase small subunit 1 Neighboring gene uncharacterized LOC130591335 Neighboring gene E3 ubiquitin ligase PQT3-like Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydro-lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3-isopropylmalate dehydratase small subunit 1
Names
3-isopropylmalate dehydratase small subunit 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026745355.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EL10.2 Primary Assembly

Genomic

  1. NC_079206.1 Reference EL10.2 Primary Assembly

    Range
    10571326..10576780
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010668732.4 → XP_010667034.2  3-isopropylmalate dehydratase small subunit 1

  2. XM_010668733.4 → XP_010667035.2  3-isopropylmalate dehydratase small subunit 1

  3. XM_057394968.1 → XP_057250951.1  3-isopropylmalate dehydratase small subunit 1

  4. XM_057394969.1 → XP_057250952.1  3-isopropylmalate dehydratase small subunit 1

Nucleotide Protein
Heading Accession and Version

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