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Samd4a sterile alpha motif domain containing 4A [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104868078, updated on 12-Mar-2024

Summary

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Gene symbol
Samd4a
Gene description
sterile alpha motif domain containing 4A
See related
Ensembl:ENSFDAG00000017942
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900929.1 (73996701..74088368)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011045181.1 (3486421..3576237, complement)

NW_022900929.1Genomic Context describing neighboring genes Neighboring gene cell growth regulator with ring finger domain 1 Neighboring gene uncharacterized LOC104867954 Neighboring gene GTP cyclohydrolase 1 Neighboring gene WD repeat and HMG-box DNA binding protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation repressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear-transcribed mRNA poly(A) tail shortening IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of mRNA stability IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein Smaug homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900929.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    73996701..74088368
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010632693.3 → XP_010630995.1  protein Smaug homolog 1

    Related
    ENSFDAP00000010066.1
    Conserved Domains (2) summary
    cd09557
    Location:220 → 282
    SAM_Smaug; SAM domain of Smaug subfamily
    smart00454
    Location:225 → 283
    SAM; Sterile alpha motif
Nucleotide Protein
Heading Accession and Version

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