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LOC104731195 separase [ Camelina sativa (false flax) ]

Gene ID: 104731195, updated on 9-Nov-2023

Summary

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Gene symbol
LOC104731195
Gene description
separase
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelina sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Genomic context

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Location:
chromosome: 12
Exon count:
27
Annotation release Status Assembly Chr Location
101 current Cs (GCF_000633955.1) 12 NC_025696.1 (10466863..10477532)

Chromosome 12 - NC_025696.1Genomic Context describing neighboring genes Neighboring gene SPX domain-containing membrane protein At4g22990 Neighboring gene molybdenum cofactor sulfurase-like Neighboring gene ubiquitin carboxyl-terminal hydrolase MINDY-1-like Neighboring gene agamous-like MADS-box protein AGL19

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_025696.1 Chromosome 12 Reference Cs

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in meiotic chromosome separation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitotic spindle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
separase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelina sativa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cs

Genomic

  1. NC_025696.1 Reference Cs

    Range
    10466863..10477532
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010450493.1 → XP_010448795.1  separase isoform X1

    Conserved Domains (1) summary
    pfam03568
    Location:1653 → 2072
    Peptidase_C50; Peptidase family C50

  2. XM_010450496.1 → XP_010448798.1  separase isoform X3

    Conserved Domains (1) summary
    pfam03568
    Location:1653 → 2072
    Peptidase_C50; Peptidase family C50

  3. XM_010450494.1 → XP_010448796.1  separase isoform X2

    Conserved Domains (1) summary
    pfam03568
    Location:1653 → 2069
    Peptidase_C50; Peptidase family C50

  4. XM_010450497.1 → XP_010448799.1  separase isoform X4

    Conserved Domains (1) summary
    pfam03568
    Location:1623 → 2042
    Peptidase_C50; Peptidase family C50
Nucleotide Protein
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