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LOC104723224 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 2-like [ Camelina sativa (false flax) ]

Gene ID: 104723224, updated on 9-Nov-2023

Summary

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Gene symbol
LOC104723224
Gene description
1,4-dihydroxy-2-naphthoyl-CoA thioesterase 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelina sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Genomic context

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See LOC104723224 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Cs (GCF_000633955.1) 2 NC_025686.1 (12730197..12731478)

Chromosome 2 - NC_025686.1Genomic Context describing neighboring genes Neighboring gene LRR receptor-like serine/threonine-protein kinase RCH1 Neighboring gene U4/U6 small nuclear ribonucleoprotein Prp31 pseudogene Neighboring gene defensin-like protein 76 Neighboring gene defensin-like protein 76

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_025686.1 Chromosome 2 Reference Cs

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly and characterization of Camelina sativa transcriptome by paired-end sequencing. Liang C, et al. BMC Genomics, 2013 Mar 5. PMID 23496985, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phylloquinone biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1,4-dihydroxy-2-naphthoyl-CoA thioesterase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelina sativa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cs

Genomic

  1. NC_025686.1 Reference Cs

    Range
    12730197..12731478
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010441559.2 → XP_010439861.1  1,4-dihydroxy-2-naphthoyl-CoA thioesterase 2-like

    Conserved Domains (1) summary
    cl00509
    Location:10 → 157
    hot_dog; The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated ...
Nucleotide Protein
Heading Accession and Version

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