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LOC104596958 anthranilate synthase alpha subunit 1, chloroplastic [ Nelumbo nucifera (sacred lotus) ]

Gene ID: 104596958, updated on 21-Dec-2023

Summary

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Gene symbol
LOC104596958
Gene description
anthranilate synthase alpha subunit 1, chloroplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Nelumbo nucifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Proteales; Nelumbonaceae; Nelumbo
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Chinese Lotus 1.1 (GCF_000365185.1) Unplaced Scaffold NW_010729091.1 (452431..477217, complement)

NW_010729091.1Genomic Context describing neighboring genes Neighboring gene probable NAD(P)H dehydrogenase (quinone) FQR1-like 3 Neighboring gene lactosylceramide 4-alpha-galactosyltransferase-like Neighboring gene uncharacterized LOC104596959 Neighboring gene U-box domain-containing protein 4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010729091.1 Unplaced Scaffold Reference Chinese Lotus 1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables anthranilate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tryptophan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anthranilate synthase alpha subunit 1, chloroplastic; anthranilate synthase alpha subunit 2, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nelumbo nucifera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Chinese Lotus 1.1 Primary Assembly

Genomic

  1. NW_010729091.1 Reference Chinese Lotus 1.1 Primary Assembly

    Range
    452431..477217 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010258290.1 → XP_010256592.1  anthranilate synthase alpha subunit 2, chloroplastic isoform X3

    UniProtKB/TrEMBL
    A0A1U7ZQT8
    Conserved Domains (1) summary
    PLN02445
    Location:41 → 564
    PLN02445; anthranilate synthase component I

  2. XM_010258289.2 → XP_010256591.1  anthranilate synthase alpha subunit 2, chloroplastic isoform X2

    UniProtKB/TrEMBL
    A0A1U7ZWG0
    Conserved Domains (3) summary
    PLN02445
    Location:77 → 572
    PLN02445; anthranilate synthase component I
    pfam00425
    Location:312 → 555
    Chorismate_bind; chorismate binding enzyme
    pfam04715
    Location:96 → 250
    Anth_synt_I_N; Anthranilate synthase component I, N terminal region

  3. XM_010258288.2 → XP_010256590.1  anthranilate synthase alpha subunit 1, chloroplastic isoform X1

    UniProtKB/TrEMBL
    A0A1U8A5F2
    Conserved Domains (3) summary
    PLN02445
    Location:77 → 599
    PLN02445; anthranilate synthase component I
    pfam00425
    Location:312 → 582
    Chorismate_bind; chorismate binding enzyme
    pfam04715
    Location:96 → 250
    Anth_synt_I_N; Anthranilate synthase component I, N terminal region
Nucleotide Protein
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