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LOC104589843 phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN2A-like [ Nelumbo nucifera (sacred lotus) ]

Gene ID: 104589843, updated on 21-Dec-2023

Summary

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Gene symbol
LOC104589843
Gene description
phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN2A-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Nelumbo nucifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Proteales; Nelumbonaceae; Nelumbo
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Chinese Lotus 1.1 (GCF_000365185.1) Unplaced Scaffold NW_010729348.1 (331458..382715)

NW_010729348.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104589841 Neighboring gene probable apyrase 1 Neighboring gene spindle and kinetochore-associated protein 2 Neighboring gene uncharacterized LOC104589845

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010729348.1 Unplaced Scaffold Reference Chinese Lotus 1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN2A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nelumbo nucifera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Chinese Lotus 1.1 Primary Assembly

Genomic

  1. NW_010729348.1 Reference Chinese Lotus 1.1 Primary Assembly

    Range
    331458..382715
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010248278.1 → XP_010246580.1  phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN2A-like

    UniProtKB/TrEMBL
    A0A1U7ZGB3, A0A822YDE6
    Conserved Domains (3) summary
    pfam00985
    Location:440 → 587
    MSA_2; Merozoite Surface Antigen 2 (MSA-2) family
    smart00404
    Location:207 → 265
    PTPc_motif; Protein tyrosine phosphatase, catalytic domain motif
    COG2453
    Location:123 → 305
    CDC14; Protein-tyrosine phosphatase [Signal transduction mechanisms]
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases