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KBTBD11-OT1 KBTBD11 overlapping transcript 1 [ Homo sapiens (human) ]

Gene ID: 104266957, updated on 23-Nov-2021

Summary

Official Symbol
KBTBD11-OT1provided by HGNC
Official Full Name
KBTBD11 overlapping transcript 1provided by HGNC
Primary source
HGNC:HGNC:49147
See related
Ensembl:ENSG00000253696
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in small intestine (RPKM 3.6), duodenum (RPKM 3.0) and 10 other tissues See more
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Genomic context

See KBTBD11-OT1 in Genome Data Viewer
Location:
8p23.3
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 8 NC_000008.11 (1971397..1976444)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (1919563..1924610)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene Rho guanine nucleotide exchange factor 10 Neighboring gene microRNA 596 Neighboring gene uncharacterized LOC100131395 Neighboring gene KBTBD11 antisense RNA 1 Neighboring gene kelch repeat and BTB domain containing 11 Neighboring gene VISTA enhancer hs2514 Neighboring gene myomesin 2 Neighboring gene microRNA 7160

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • KBTBD11 overlapping transcript 1 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_126346.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC019257, BX104191
    Related
    ENST00000518539.2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p13 Primary Assembly

    Range
    1971397..1976444
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_1

Genomic

  1. NT_187576.1 Reference GRCh38.p13 ALT_REF_LOCI_1

    Range
    154773..159820
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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