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SLC6A4 solute carrier family 6 member 4 [ Gavia stellata (red-throated loon) ]

Gene ID: 104257862, updated on 6-Jun-2024

Summary

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Gene symbol
SLC6A4
Gene description
solute carrier family 6 member 4
Locus tag
N328_00841
Gene type
protein coding
RefSeq status
MODEL
Organism
Gavia stellata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Gaviiformes; Gaviidae; Gavia
Orthologs
human mouse all
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Genomic context

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See SLC6A4 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_09 current bGavSte3.hap2 (GCF_030936135.1) 25 NC_082618.1 (8112467..8124743, complement)
100 previous assembly ASM69087v1 (GCF_000690875.1) Unplaced Scaffold NW_009306471.1 (33774..46243)

Chromosome 25 - NC_082618.1Genomic Context describing neighboring genes Neighboring gene EF-hand calcium binding domain 5 Neighboring gene nuclear speckle splicing regulatory protein 1 Neighboring gene bleomycin hydrolase Neighboring gene transmembrane and immunoglobulin domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serotonin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serotonin:sodium:chloride symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in serotonin uptake IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium-dependent serotonin transporter
Names
Sodium-dependent serotonin transporter

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030936135.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGavSte3.hap2

Genomic

  1. NC_082618.1 Reference bGavSte3.hap2

    Range
    8112467..8124743 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009812777.2 → XP_009811079.2  sodium-dependent serotonin transporter

    UniProtKB/TrEMBL
    A0A093FBX7
Nucleotide Protein
Heading Accession and Version

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