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LOC104224743 sister chromatid cohesion 1 protein 3 [ Nicotiana sylvestris (wood tobacco) ]

Gene ID: 104224743, updated on 22-Oct-2023

Summary

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Gene symbol
LOC104224743
Gene description
sister chromatid cohesion 1 protein 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Nicotiana sylvestris
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current Nsyl (GCF_000393655.1) Unplaced Scaffold NW_009569274.1 (45247..52213)

NW_009569274.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104224742 Neighboring gene multiple C2 and transmembrane domain-containing protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009569274.1 Unplaced Scaffold Reference Nsyl Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitotic sister chromatid cohesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in replication-born double-strand break repair via sister chromatid exchange IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptonemal complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cohesin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptonemal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sister chromatid cohesion 1 protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nicotiana sylvestris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Nsyl Primary Assembly

Genomic

  1. NW_009569274.1 Reference Nsyl Primary Assembly

    Range
    45247..52213
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009776438.1 → XP_009774740.1  sister chromatid cohesion 1 protein 3

    UniProtKB/TrEMBL
    A0A1U7WKF7
    Conserved Domains (2) summary
    pfam04824
    Location:600 → 651
    Rad21_Rec8; Conserved region of Rad21 / Rec8 like protein
    pfam04825
    Location:1 → 103
    Rad21_Rec8_N; N terminus of Rad21 / Rec8 like protein

RNA

  1. XR_710417.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases