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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001109975.1 → NP_001103445.1 synaptopodin isoform B
See identical proteins and their annotated locations for NP_001103445.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (B) uses an alternate splice site in the coding region which results in an early stop codon, compared to variant A. The resulting protein (isoform B) has a shorter, distinct C-terminus when compared to isoform A.
- Source sequence(s)
-
AK141564, AW050323
- Consensus CDS
-
CCDS50298.1
- UniProtKB/TrEMBL
-
Q3URF1
- Related
- ENSMUSP00000110973.4, ENSMUST00000115318.4
- Conserved Domains (2) summary
-
- PHA03247
Location:52 → 356
- PHA03247; large tegument protein UL36; Provisional
- PRK13914
Location:15 → 132
- PRK13914; invasion associated secreted endopeptidase; Provisional
-
NM_177340.2 → NP_796314.2 synaptopodin isoform A
See identical proteins and their annotated locations for NP_796314.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (A) represents the longer transcript and encodes the longer isoform (A).
- Source sequence(s)
-
AK158933, BC065127, BY128958
- Consensus CDS
-
CCDS37833.1
- UniProtKB/TrEMBL
- Q3TY32, Q3U336
- Related
- ENSMUSP00000095174.4, ENSMUST00000097566.10
- Conserved Domains (2) summary
-
- PHA03247
Location:576 → 848
- PHA03247; large tegument protein UL36; Provisional
- PRK13914
Location:15 → 132
- PRK13914; invasion associated endopeptidase