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LOC103844470 uncharacterized LOC103844470 [ Brassica rapa (field mustard) ]

Gene ID: 103844470, updated on 27-Mar-2021

Summary

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Gene symbol
LOC103844470
Gene description
uncharacterized LOC103844470
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica rapa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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Location:
chromosome: A7
Exon count:
1
Annotation release Status Assembly Chr Location
103.20201202 current CAAS_Brap_v3.01 (GCF_000309985.2) A07 NC_024801.2 (4007732..4014555)
101 previous assembly Brapa_1.0 (GCF_000309985.1) A10 NC_024804.1 (3120816..3123155)

Chromosome A07 - NC_024801.2Genomic Context describing neighboring genes Neighboring gene beta-galactosidase 15 Neighboring gene glycine-rich cell wall structural protein 2 Neighboring gene uncharacterized protein DDB_G0282077 Neighboring gene uncharacterized LOC103844348 Neighboring gene probable E3 ubiquitin-protein ligase RHA4A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC103844470

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica rapa Updated Annotation Release 103.20201202

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAAS_Brap_v3.01 Primary Assembly

Genomic

  1. NC_024801.2 Reference CAAS_Brap_v3.01 Primary Assembly

    Range
    4007732..4014555
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033275709.1 → XP_033131600.1  uncharacterized protein LOC103844470

    Conserved Domains (3) summary
    cd00303
    Location:288 → 376
    retropepsin_like; Retropepsins; pepsin-like aspartate proteases
    cd01647
    Location:531 → 707
    RT_LTR; Reverse transcriptases (RTs) from retrotransposons and retroviruses which have long terminal repeats (LTRs) in their DNA copies but not in their RNA template. RT catalyzes DNA replication from an RNA template, and is responsible for the replication of ...
    cl29674
    Location:30 → 121
    Retrotrans_gag; Retrotransposon gag protein
Nucleotide Protein
Heading Accession and Version

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