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LOC103843966 non-specific phospholipase C1 [ Brassica rapa (field mustard) ]

Gene ID: 103843966, updated on 7-Dec-2023

Summary

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Gene symbol
LOC103843966
Gene description
non-specific phospholipase C1
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica rapa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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Location:
chromosome: A10
Exon count:
3
Annotation release Status Assembly Chr Location
103.20201202 current CAAS_Brap_v3.01 (GCF_000309985.2) A10 NC_024804.2 (3167696..3170076, complement)
101 previous assembly Brapa_1.0 (GCF_000309985.1) A10 NC_024804.1 (993180..995514)

Chromosome A10 - NC_024804.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103843967 Neighboring gene O-glucosyltransferase rumi Neighboring gene enolase-like Neighboring gene UDP-glycosyltransferase 71C5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, acting on ester bonds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
non-specific phospholipase C1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica rapa Updated Annotation Release 103.20201202

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAAS_Brap_v3.01 Primary Assembly

Genomic

  1. NC_024804.2 Reference CAAS_Brap_v3.01 Primary Assembly

    Range
    3167696..3170076 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009120730.3 → XP_009118978.1  non-specific phospholipase C1

    UniProtKB/TrEMBL
    A0A397XIB9, M4DGE1
    Conserved Domains (1) summary
    pfam04185
    Location:34 → 392
    Phosphoesterase; Phosphoesterase family
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases