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LOC103836914 beta-amylase 2, chloroplastic [ Brassica rapa (field mustard) ]

Gene ID: 103836914, updated on 7-Dec-2023

Summary

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Gene symbol
LOC103836914
Gene description
beta-amylase 2, chloroplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica rapa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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Location:
chromosome: A9
Exon count:
8
Annotation release Status Assembly Chr Location
103.20201202 current CAAS_Brap_v3.01 (GCF_000309985.2) A09 NC_024803.2 (248489..251221, complement)
101 previous assembly Brapa_1.0 (GCF_000309985.1) A9 NC_024803.1 (959714..962211, complement)

Chromosome A09 - NC_024803.2Genomic Context describing neighboring genes Neighboring gene digalactosyldiacylglycerol synthase 2, chloroplastic Neighboring gene probable methyltransferase PMT23 Neighboring gene uncharacterized LOC117128280 Neighboring gene transcription factor MYC1 Neighboring gene 16 kDa phloem protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-amylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in polysaccharide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-amylase 2, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica rapa Updated Annotation Release 103.20201202

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAAS_Brap_v3.01 Primary Assembly

Genomic

  1. NC_024803.2 Reference CAAS_Brap_v3.01 Primary Assembly

    Range
    248489..251221 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009113229.3 → XP_009111477.1  beta-amylase 2, chloroplastic

    UniProtKB/TrEMBL
    A0A8D9FXG5, M4F8D2
    Conserved Domains (1) summary
    cl07893
    Location:93 → 523
    AmyAc_family; Alpha amylase catalytic domain family
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases