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LOC103700926 putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial [ Phoenix dactylifera (date palm) ]

Gene ID: 103700926, updated on 7-Dec-2023

Summary

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Gene symbol
LOC103700926
Gene description
putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial
Gene type
protein coding
RefSeq status
MODEL
Organism
Phoenix dactylifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Genomic context

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See LOC103700926 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
1
Annotation release Status Assembly Chr Location
103 current palm_55x_up_171113_PBpolish2nd_filt_p (GCF_009389715.1) 16 NC_052407.1 (8505235..8507797, complement)
102 previous assembly DPV01 (GCF_000413155.1) Unplaced Scaffold NW_008246518.1 (1990873..1993129)

Chromosome 16 - NC_052407.1Genomic Context describing neighboring genes Neighboring gene chorismate mutase 1, chloroplastic Neighboring gene uncharacterized LOC103700861 Neighboring gene clp protease adapter protein ClpF, chloroplastic Neighboring gene mitotic checkpoint protein BUB3.3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phoenix dactylifera Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference palm_55x_up_171113_PBpolish2nd_filt_p Primary Assembly

Genomic

  1. NC_052407.1 Reference palm_55x_up_171113_PBpolish2nd_filt_p Primary Assembly

    Range
    8505235..8507797 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008782825.4 → XP_008781047.3  putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial

    UniProtKB/TrEMBL
    A0A8B7BLK1
    Conserved Domains (3) summary
    PLN03077
    Location:4 → 689
    PLN03077; Protein ECB2; Provisional
    sd00004
    Location:574 → 601
    PPR; PPR repeat [structural motif]
    pfam13041
    Location:266 → 313
    PPR_2; PPR repeat family
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases