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Sec14l4 SEC14-like lipid binding 4 [ Mus musculus (house mouse) ]

Gene ID: 103655, updated on 8-Feb-2024

Summary

Official Symbol
Sec14l4provided by MGI
Official Full Name
SEC14-like lipid binding 4provided by MGI
Primary source
MGI:MGI:2144095
See related
Ensembl:ENSMUSG00000019368 AllianceGenome:MGI:2144095
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
SPF; TAP
Summary
Predicted to enable lipid binding activity. Orthologous to several human genes including SEC14L4 (SEC14 like lipid binding 4). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in liver adult (RPKM 35.1), lung adult (RPKM 18.2) and 3 other tissues See more
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Genomic context

See Sec14l4 in Genome Data Viewer
Location:
11 A1; 11 2.84 cM
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (3981377..3998426)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (4031378..4048426)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene galactose-3-O-sulfotransferase 1 Neighboring gene predicted gene, 46265 Neighboring gene predicted gene 11954 Neighboring gene STARR-seq mESC enhancer starr_28368 Neighboring gene SEC14-like lipid binding 3 Neighboring gene predicted gene, 51935 Neighboring gene mitochondrial fission process 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • MGC30313

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 
enables molecular_function ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
SEC14-like protein 4
Names
SEC14-like 2
SEC14-like 4
alpha-tocopherol associated protein
squalene transfer protein
supernatant protein factor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_146013.1NP_666125.1  SEC14-like protein 4

    See identical proteins and their annotated locations for NP_666125.1

    Status: PROVISIONAL

    Source sequence(s)
    BC026948
    Consensus CDS
    CCDS24374.1
    UniProtKB/Swiss-Prot
    Q8R0F9
    Related
    ENSMUSP00000019512.8, ENSMUST00000019512.8
    Conserved Domains (3) summary
    smart00516
    Location:77244
    SEC14; Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)
    smart01100
    Location:1359
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    pfam13897
    Location:284379
    GOLD_2; Golgi-dynamics membrane-trafficking

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    3981377..3998426
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006514437.3XP_006514500.1  SEC14-like protein 4 isoform X1

    See identical proteins and their annotated locations for XP_006514500.1

    Conserved Domains (2) summary
    smart00516
    Location:23190
    SEC14; Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)
    pfam13897
    Location:230325
    GOLD_2; Golgi-dynamics membrane-trafficking
  2. XM_006514438.3XP_006514501.1  SEC14-like protein 4 isoform X1

    See identical proteins and their annotated locations for XP_006514501.1

    Conserved Domains (2) summary
    smart00516
    Location:23190
    SEC14; Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)
    pfam13897
    Location:230325
    GOLD_2; Golgi-dynamics membrane-trafficking
  3. XM_006514439.3XP_006514502.1  SEC14-like protein 4 isoform X1

    See identical proteins and their annotated locations for XP_006514502.1

    Conserved Domains (2) summary
    smart00516
    Location:23190
    SEC14; Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)
    pfam13897
    Location:230325
    GOLD_2; Golgi-dynamics membrane-trafficking