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LOC103643901 threonine dehydratase 1 biosynthetic, chloroplastic [ Zea mays ]

Gene ID: 103643901, updated on 25-Jan-2024

Summary

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Gene symbol
LOC103643901
Gene description
threonine dehydratase 1 biosynthetic, chloroplastic
Locus tag
ZEAMMB73_Zm00001d033750
Gene type
protein coding
RefSeq status
MODEL
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
GRMZM2G155323
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Genomic context

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Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 1 NC_050096.1 (274548003..274558477)
102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 1 NC_024459.2 (272770258..272780688)

Chromosome 1 - NC_050096.1Genomic Context describing neighboring genes Neighboring gene hydroxyproline O-galactosyltransferase GALT6 Neighboring gene pentatricopeptide repeat-containing protein Neighboring gene dynamin-related protein 1C Neighboring gene uncharacterized LOC100277299

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insights into corn genes derived from large-scale cDNA sequencing. Alexandrov NN, et al. Plant Mol Biol, 2009 Jan. PMID 18937034, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables threonine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isoleucine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in threonine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
threonine dehydratase 1 biosynthetic, chloroplastic
Names
threonine dehydratase biosynthetic, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

  1. NC_050096.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Range
    274548003..274558477
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008667072.3 → XP_008665294.1  threonine dehydratase 1 biosynthetic, chloroplastic

    See identical proteins and their annotated locations for XP_008665294.1

    UniProtKB/TrEMBL
    A0A1D6L202, A0A1D6L203
    Conserved Domains (1) summary
    PLN02550
    Location:19 → 602
    PLN02550; threonine dehydratase
Nucleotide Protein
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