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HLCS holocarboxylase synthetase [ Equus przewalskii (Przewalski's horse) ]

Gene ID: 103550461, updated on 11-Mar-2024

Summary

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Gene symbol
HLCS
Gene description
holocarboxylase synthetase
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus przewalskii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See HLCS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Burgud (GCF_000696695.1) Unplaced Scaffold NW_007673508.1 (555095..759607, complement)

NW_007673508.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103550460 Neighboring gene SIM bHLH transcription factor 2 Neighboring gene ripply transcriptional repressor 3 Neighboring gene phosphatidylinositol glycan anchor biosynthesis class P

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007673508 unplaced scaffold reference Burgud Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables biotin-[acetyl-CoA-carboxylase] ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein modification process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
biotin--protein ligase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus przewalskii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Burgud Primary Assembly

Genomic

  1. NW_007673508.1 Reference Burgud Primary Assembly

    Range
    555095..759607 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008519337.1 → XP_008517559.1  biotin--protein ligase

    See identical proteins and their annotated locations for XP_008517559.1

    Conserved Domains (4) summary
    COG0340
    Location:467 → 710
    BirA2; Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme transport and metabolism]
    pfam02237
    Location:663 → 710
    BPL_C; Biotin protein ligase C terminal domain
    pfam03099
    Location:465 → 597
    BPL_LplA_LipB; Biotin/lipoate A/B protein ligase family
    cl00020
    Location:200 → 454
    GAT_1; Type 1 glutamine amidotransferase (GATase1)-like domain

  2. XM_008519338.1 → XP_008517560.1  biotin--protein ligase

    See identical proteins and their annotated locations for XP_008517560.1

    Conserved Domains (4) summary
    COG0340
    Location:467 → 710
    BirA2; Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme transport and metabolism]
    pfam02237
    Location:663 → 710
    BPL_C; Biotin protein ligase C terminal domain
    pfam03099
    Location:465 → 597
    BPL_LplA_LipB; Biotin/lipoate A/B protein ligase family
    cl00020
    Location:200 → 454
    GAT_1; Type 1 glutamine amidotransferase (GATase1)-like domain
Nucleotide Protein
Heading Accession and Version

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