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LOC103491846 carotenoid 9,10(9',10')-cleavage dioxygenase-like [ Cucumis melo (muskmelon) ]

Gene ID: 103491846, updated on 23-Nov-2023

Summary

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Gene symbol
LOC103491846
Gene description
carotenoid 9,10(9',10')-cleavage dioxygenase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis melo
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC103491846 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
4
Annotation release Status Assembly Chr Location
102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 6 NC_066862.1 (20230586..20233841)
101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546290.1 (5347315..5348509, complement)

Chromosome 6 - NC_066862.1Genomic Context describing neighboring genes Neighboring gene cytochrome c1-2, heme protein, mitochondrial Neighboring gene uncharacterized LOC103491847 Neighboring gene dof zinc finger protein DOF5.7 Neighboring gene probable rhamnogalacturonate lyase B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carotenoid dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carotene catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast stroma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carotenoid 9,10(9',10')-cleavage dioxygenase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_Cmelo_AY_1.0 Primary Assembly

Genomic

  1. NC_066862.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Range
    20230586..20233841
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051086278.1 → XP_050942235.1  carotenoid 9,10(9',10')-cleavage dioxygenase-like

RNA

  1. XR_007821768.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases