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fam83e family with sequence similarity 83 member E [ Poecilia reticulata (guppy) ]

Gene ID: 103464478, updated on 11-Mar-2024

Summary

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Gene symbol
fam83e
Gene description
family with sequence similarity 83 member E
See related
Ensembl:ENSPREG00000005366
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: LG5
Exon count:
10
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG5 NC_024335.1 (6202656..6216050, complement)

Linkage Group LG5 - NC_024335.1Genomic Context describing neighboring genes Neighboring gene phosphopantothenoylcysteine synthetase Neighboring gene UTP3 small subunit processome component Neighboring gene epithelial membrane protein 3a (MAM blood group) Neighboring gene coiled-coil domain-containing protein 30-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024335.1 Chromosome LG5 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in epidermal growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein FAM83D-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024335.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    6202656..6216050 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008408611.2 → XP_008406833.1  protein FAM83D-like isoform X1

    See identical proteins and their annotated locations for XP_008406833.1

    UniProtKB/TrEMBL
    A0A3P9NE82
    Related
    ENSPREP00000007827.1, ENSPRET00000007919.1
    Conserved Domains (2) summary
    pfam07894
    Location:18 → 281
    DUF1669; Protein of unknown function (DUF1669)
    pfam13091
    Location:146 → 274
    PLDc_2; PLD-like domain

  2. XM_008408610.2 → XP_008406832.1  protein FAM83D-like isoform X1

    See identical proteins and their annotated locations for XP_008406832.1

    UniProtKB/TrEMBL
    A0A3P9NE82
    Conserved Domains (2) summary
    pfam07894
    Location:18 → 281
    DUF1669; Protein of unknown function (DUF1669)
    pfam13091
    Location:146 → 274
    PLDc_2; PLD-like domain

  3. XM_008408612.2 → XP_008406834.1  protein FAM83D-like isoform X2

    Conserved Domains (2) summary
    pfam07894
    Location:18 → 281
    DUF1669; Protein of unknown function (DUF1669)
    pfam13091
    Location:146 → 274
    PLDc_2; PLD-like domain
Nucleotide Protein
Heading Accession and Version

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