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LOC103450431 cytokinin dehydrogenase 5-like [ Malus domestica (apple) ]

Gene ID: 103450431, updated on 22-Oct-2023

Summary

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Gene symbol
LOC103450431
Gene description
cytokinin dehydrogenase 5-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Malus domestica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
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Genomic context

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Location:
chromosome: 15
Exon count:
5
Annotation release Status Assembly Chr Location
102 current ASM211411v1 (GCF_002114115.1) 15 NC_041803.1 (1242516..1248813)
101 previous assembly MalDomGD1.0 (GCF_000148765.1) 12 NC_024250.1 (21594951..21601547, complement)

Chromosome 15 - NC_041803.1Genomic Context describing neighboring genes Neighboring gene jacalin-related lectin 3-like Neighboring gene pentatricopeptide repeat-containing protein At1g19720-like Neighboring gene ribosomal RNA small subunit methyltransferase I Neighboring gene probable ubiquitin-conjugating enzyme E2 18

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytokinin dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytokinin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytokinin dehydrogenase 5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Malus domestica Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM211411v1 Primary Assembly

Genomic

  1. NC_041803.1 Reference ASM211411v1 Primary Assembly

    Range
    1242516..1248813
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008389775.3 → XP_008387997.1  cytokinin dehydrogenase 5-like

    UniProtKB/TrEMBL
    A0A498HUK0
    Conserved Domains (3) summary
    PLN02441
    Location:1 → 519
    PLN02441; cytokinin dehydrogenase
    pfam01565
    Location:60 → 206
    FAD_binding_4; FAD binding domain
    pfam09265
    Location:238 → 519
    Cytokin-bind; Cytokinin dehydrogenase 1, FAD and cytokinin binding
Nucleotide Protein
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