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LOC103426516 ATPase family AAA domain-containing protein 3-B [ Malus domestica (apple) ]

Gene ID: 103426516, updated on 22-Oct-2023

Summary

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Gene symbol
LOC103426516
Gene description
ATPase family AAA domain-containing protein 3-B
Gene type
protein coding
RefSeq status
MODEL
Organism
Malus domestica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
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Genomic context

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See LOC103426516 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
102 current ASM211411v1 (GCF_002114115.1) 1 NC_041789.1 (32447479..32451595, complement)
101 previous assembly MalDomGD1.0 (GCF_000148765.1) 1 Unlocalized Scaffold (alt_haplotype3.MalDomGD1.0) NW_007545908.1 (1973743..1977806, complement)

Chromosome 1 - NC_041789.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At1g77170, mitochondrial Neighboring gene NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial Neighboring gene 4-coumarate--CoA ligase 2-like Neighboring gene transducin beta-like protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrion organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATPase family AAA domain-containing protein 3-B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Malus domestica Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM211411v1 Primary Assembly

Genomic

  1. NC_041789.1 Reference ASM211411v1 Primary Assembly

    Range
    32447479..32451595 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008364601.3 → XP_008362823.1  ATPase family AAA domain-containing protein 3-B

    UniProtKB/TrEMBL
    A0A498KQV1
    Conserved Domains (5) summary
    smart00382
    Location:406 → 538
    AAA; ATPases associated with a variety of cellular activities
    pfam00004
    Location:410 → 537
    AAA; ATPase family associated with various cellular activities (AAA)
    pfam12037
    Location:82 → 342
    DUF3523; Domain of unknown function (DUF3523)
    cd16269
    Location:217 → 236
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:124 → 245
    GBP_C; Guanylate-binding protein, C-terminal domain
Nucleotide Protein
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