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atf6b activating transcription factor 6 beta [ Cynoglossus semilaevis (tongue sole) ]

Gene ID: 103393796, updated on 12-Sep-2024

Summary

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Gene symbol
atf6b
Gene description
activating transcription factor 6 beta
Gene type
protein coding
RefSeq status
MODEL
Organism
Cynoglossus semilaevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 18
Exon count:
18
Annotation release Status Assembly Chr Location
102 current Cse_v1.0 (GCF_000523025.1) 18 NC_024324.1 (599125..606190, complement)

Chromosome 18 - NC_024324.1Genomic Context describing neighboring genes Neighboring gene regulating synaptic membrane exocytosis protein 2-like Neighboring gene low density lipoprotein receptor-related protein 12 Neighboring gene uncharacterized LOC103393795 Neighboring gene uncharacterized LOC107989968

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024324.1 Chromosome 18 Reference Cse_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum unfolded protein response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclic AMP-dependent transcription factor ATF-6 beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cse_v1.0 Primary Assembly

Genomic

  1. NC_024324.1 Reference Cse_v1.0 Primary Assembly

    Range
    599125..606190 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017041170.2 → XP_016896659.1  cyclic AMP-dependent transcription factor ATF-6 beta

    UniProtKB/TrEMBL
    A0A3P8WPZ5
Nucleotide Protein
Heading Accession and Version

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