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polr1d RNA polymerase I and III subunit D [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103366847, updated on 11-Mar-2024

Summary

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Gene symbol
polr1d
Gene description
RNA polymerase I and III subunit D
See related
Ensembl:ENSSPAG00000011764
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007578718.1 (169716..175834, complement)

NW_007578718.1Genomic Context describing neighboring genes Neighboring gene cysteinyl leukotriene receptor 1-like Neighboring gene endothelin B receptor-like Neighboring gene synaptobrevin-like 1 Neighboring gene microtubule associated tumor suppressor 1a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007578718 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of RNA polymerase III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerases I and III subunit RPAC2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007578718.1 Reference Stegastes_partitus-1.0.2

    Range
    169716..175834 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008294690.1 → XP_008292912.1  DNA-directed RNA polymerases I and III subunit RPAC2-like

    UniProtKB/TrEMBL
    A0A3B5A5M5
    Related
    ENSSPAP00000015601.1, ENSSPAT00000015852.1
    Conserved Domains (2) summary
    cd07029
    Location:14 → 98
    RNAP_I_III_AC19; AC19 subunit of Eukaryotic RNA polymerase (RNAP) I and RNAP III
    pfam01193
    Location:25 → 56
    RNA_pol_L; RNA polymerase Rpb3/Rpb11 dimerization domain
Nucleotide Protein
Heading Accession and Version

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