U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

pdcd4a programmed cell death 4a [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103361051, updated on 11-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
pdcd4a
Gene description
programmed cell death 4a
See related
Ensembl:ENSSPAG00000000564
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007577742.1 (652190..673305, complement)

NW_007577742.1Genomic Context describing neighboring genes Neighboring gene early growth response protein 2b-like Neighboring gene mannosyl-oligosaccharide glucosidase Neighboring gene WW domain binding protein 1 Neighboring gene MAX dimerization protein 4

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_007577742 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
programmed cell death protein 4-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007577742.1 Reference Stegastes_partitus-1.0.2

    Range
    652190..673305 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008287052.1 → XP_008285274.1  programmed cell death protein 4-like isoform X2

    UniProtKB/TrEMBL
    A0A3B4YX36, A0A3B4ZGQ2
    Related
    ENSSPAP00000000777.1, ENSSPAT00000000788.1
    Conserved Domains (1) summary
    smart00544
    Location:319 → 422
    MA3; Domain in DAP-5, eIF4G, MA-3 and other proteins

  2. XM_008287046.1 → XP_008285268.1  programmed cell death protein 4-like isoform X1

    UniProtKB/TrEMBL
    A0A3B4YX36, A0A9Y4N7H4
    Conserved Domains (1) summary
    smart00544
    Location:329 → 432
    MA3; Domain in DAP-5, eIF4G, MA-3 and other proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases