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LINC01391 long intergenic non-protein coding RNA 1391 [ Homo sapiens (human) ]

Gene ID: 103344930, updated on 1-Aug-2020

Summary

Official Symbol
LINC01391provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1391provided by HGNC
Primary source
HGNC:HGNC:50666
See related
Ensembl:ENSG00000244578
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in ovary (RPKM 1.1), endometrium (RPKM 0.8) and 2 other tissues See more

Genomic context

See LINC01391 in Genome Data Viewer
Location:
3q22.3
Exon count:
3
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 3 NC_000003.12 (138935189..138944020, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene CRISPRi-validated cis-regulatory element chr3.4087 Neighboring gene ATP synthase membrane subunit c locus 1 pseudogene 3 Neighboring gene forkhead box L2 Neighboring gene FOXL2 neighbor

Genomic regions, transcripts, and products

Genomic Sequence:
NC_000003.12 Chromosome 3 Reference GRCh38.p13 Primary Assembly

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_121649.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC092947, AK128202
    Related
    ENST00000495287.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20200522

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p13 Primary Assembly

    Range
    138935189..138944020 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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