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Chchd10 coiled-coil-helix-coiled-coil-helix domain containing 10 [ Mus musculus (house mouse) ]

Gene ID: 103172, updated on 2-Nov-2024

Summary

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Official Symbol
Chchd10provided by MGI
Official Full Name
coiled-coil-helix-coiled-coil-helix domain containing 10provided by MGI
Primary source
MGI:MGI:2143558
See related
Ensembl:ENSMUSG00000049422 AllianceGenome:MGI:2143558
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ndg2; 1620401E04Rik
Summary
Predicted to be involved in several processes, including mitochondrial nucleoid organization; oxidative phosphorylation; and regulation of mitochondrion organization. Located in mitochondrion. Is expressed in several structures, including brain ventricle and choroid plexus; early embryo; hypothalamus mantle layer; renal calyx; and ventral grey horn. Used to study isolated mitochondrial myopathy. Human ortholog(s) of this gene implicated in frontotemporal dementia and/or amyotrophic lateral sclerosis 2; isolated mitochondrial myopathy; and spinal muscular atrophy, Jokela type. Orthologous to human CHCHD10 (coiled-coil-helix-coiled-coil-helix domain containing 10). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in adrenal adult (RPKM 1343.9), duodenum adult (RPKM 646.7) and 10 other tissues See more
Orthologs
human all
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Genomic context

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See Chchd10 in Genome Data Viewer
Location:
10 C1; 10 38.62 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (75768964..75773584)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (75933130..75937750)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 Neighboring gene matrix metallopeptidase 11 Neighboring gene STARR-positive B cell enhancer ABC_E8863 Neighboring gene STARR-seq mESC enhancer starr_27166 Neighboring gene predicted gene 867 Neighboring gene STARR-positive B cell enhancer ABC_E11443 Neighboring gene STARR-positive B cell enhancer ABC_E5150 Neighboring gene V-set pre-B cell surrogate light chain 3 Neighboring gene 60S ribosomal protein L27 pseudogene Neighboring gene predicted gene, 40698 Neighboring gene predicted gene 5134

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. CHCHD10(S59L/+) mouse model: Behavioral and neuropathological features of frontotemporal dementia. Genin EC, et al. Neurobiol Dis, 2024 Jun 1. PMID 38583639
  2. Nur77 gene knockout alters dopamine neuron biochemical activity and dopamine turnover. Gilbert F, et al. Biol Psychiatry, 2006 Sep 15. PMID 16893530, Free PMC Article
  3. Mitochondrial defect in muscle precedes neuromuscular junction degeneration and motor neuron death in CHCHD10(S59L/+) mouse. Genin EC, et al. Acta Neuropathol, 2019 Jul. PMID 30874923
  4. ALS/FTD mutant CHCHD10 mice reveal a tissue-specific toxic gain-of-function and mitochondrial stress response. Anderson CJ, et al. Acta Neuropathol, 2019 Jul. PMID 30877432, Free PMC Article
  5. Early death of ALS-linked CHCHD10-R15L transgenic mice with central nervous system, skeletal muscle, and cardiac pathology. Ryan ÉB, et al. iScience, 2021 Feb 19. PMID 33659869, Free PMC Article

See all (38) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Mitochondrial protein CHCHD10 inhibits NDV replication and reduces pathological changes.
    Title: Mitochondrial protein CHCHD10 inhibits NDV replication and reduces pathological changes.
  2. CHCHD10 mutations induce tissue-specific mitochondrial DNA deletions with a distinct signature.
    Title: CHCHD10 mutations induce tissue-specific mitochondrial DNA deletions with a distinct signature.
  3. Mutant CHCHD10 causes an extensive metabolic rewiring that precedes OXPHOS dysfunction in a murine model of mitochondrial cardiomyopathy.
    Title: Mutant CHCHD10 causes an extensive metabolic rewiring that precedes OXPHOS dysfunction in a murine model of mitochondrial cardiomyopathy.
  4. Loss of mitochondrial protein CHCHD10 in skeletal muscle causes neuromuscular junction impairment.
    Title: Loss of mitochondrial protein CHCHD10 in skeletal muscle causes neuromuscular junction impairment.
  5. Loss of CHCHD2 and CHCHD10 activates OMA1 peptidase to disrupt mitochondrial cristae phenocopying patient mutations.
    Title: Loss of CHCHD2 and CHCHD10 activates OMA1 peptidase to disrupt mitochondrial cristae phenocopying patient mutations.
  6. CHCHD10 is highly expressed in the neuromuscular junction post-synaptic part
    Title: Mitochondrial defect in muscle precedes neuromuscular junction degeneration and motor neuron death in CHCHD10(S59L/+) mouse.
  7. In the presence of HA1004, NBRE binding by Nur77 protein increases with time (6 h vs 2 h), whereas the final outcome of both inhibitors is apoptosis of thymic lymphoma cells.
    Title: Nur77 nuclear import and its NBRE-binding activity in thymic lymphoma cells are regulated by different mechanisms sensitive to FK506 or HA1004.
  8. Nur77 gene knockout alters dopamine neuron biochemical activity and dopamine turnover.
    Title: Nur77 gene knockout alters dopamine neuron biochemical activity and dopamine turnover.
Submit: New GeneRIF Correction

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Process Evidence Code Pubs
involved_in mitochondrial nucleoid organization ISO
Inferred from Sequence Orthology
more info
  
involved_in mitochondrion organization IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in mitochondrion organization ISO
Inferred from Sequence Orthology
more info
  
involved_in oxidative phosphorylation ISO
Inferred from Sequence Orthology
more info
  
involved_in positive regulation of cristae formation ISO
Inferred from Sequence Orthology
more info
  
involved_in positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway ISO
Inferred from Sequence Orthology
more info
  
involved_in protein-containing complex assembly ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
part_of MICOS complex ISO
Inferred from Sequence Orthology
more info
  
located_in mitochondrial intermembrane space ISO
Inferred from Sequence Orthology
more info
  
located_in mitochondrion HDA PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in mitochondrion IDA
Inferred from Direct Assay
more info
 PubMed 
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial
Names
Nur77 downstream gene 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_175329.4 → NP_780538.2  coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial

    See identical proteins and their annotated locations for NP_780538.2

    Status: VALIDATED

    Source sequence(s)
    BC083357, BM934773, W16247
    Consensus CDS
    CCDS23938.1
    UniProtKB/TrEMBL
    Q7TNL9, Q8BW15
    Related
    ENSMUSP00000151675.2, ENSMUST00000219839.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    75768964..75773584
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036155455.1 → XP_036011348.1  coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial isoform X1

    UniProtKB/TrEMBL
    Q7TNL9, Q8BW15
    Related
    ENSMUSP00000059575.7, ENSMUST00000058906.7
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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