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nufip1 nuclear FMR1 interacting protein 1 [ Poecilia formosa (Amazon molly) ]

Gene ID: 103147162, updated on 11-Mar-2024

Summary

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Gene symbol
nufip1
Gene description
nuclear FMR1 interacting protein 1
See related
Ensembl:ENSPFOG00000004016
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006800114.1 (273850..277610, complement)

NW_006800114.1Genomic Context describing neighboring genes Neighboring gene cilia and flagella associated protein 47 Neighboring gene transfer RNA glycine (anticodon GCC) Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene NOP58 ribonucleoprotein homolog (yeast) Neighboring gene ribosome biogenesis protein wdr12-like Neighboring gene WD repeat domain 12

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006800114.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in box C/D snoRNP assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear fragile X mental retardation-interacting protein 1
Names
NUFIP1, FMR1 interacting protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006800114.1 Reference Poecilia_formosa-5.1.2

    Range
    273850..277610 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016678220.1 → XP_016533706.1  nuclear fragile X mental retardation-interacting protein 1 isoform X1

  2. XM_007565368.2 → XP_007565430.1  nuclear fragile X mental retardation-interacting protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A087XDU4
    Related
    ENSPFOP00000003947.2, ENSPFOT00000003955.2
    Conserved Domains (2) summary
    pfam10453
    Location:157 → 209
    NUFIP1; Nuclear fragile X mental retardation-interacting protein 1 (NUFIP1)
    pfam12171
    Location:116 → 135
    zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
Nucleotide Protein
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