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pnpla7b patatin-like phospholipase domain containing 7b [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103040657, updated on 6-Jun-2024

Summary

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Gene symbol
pnpla7b
Gene description
patatin-like phospholipase domain containing 7b
See related
EnsemblRapid:ENSAMXG00025041369
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Also known as
pnpla7
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 22
Exon count:
36
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 22 NC_064429.1 (30001903..30053483, complement)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) Unplaced Scaffold NW_019172906.1 (615671..668955)

Chromosome 22 - NC_064429.1Genomic Context describing neighboring genes Neighboring gene atypical chemokine receptor 2-like Neighboring gene leukotriene B4 receptor 1-like Neighboring gene mitochondrial ribosomal protein L41 Neighboring gene diphthamide biosynthesis 7 Neighboring gene PAXX non-homologous end joining factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysophospholipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
patatin-like phospholipase domain-containing protein 7
Names
patatin like phospholipase domain containing 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064429.1 Reference AstMex3_surface

    Range
    30001903..30053483 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049470315.1 → XP_049326272.1  patatin-like phospholipase domain-containing protein 7

    UniProtKB/TrEMBL
    A0A8T2KY68
    Related
    ENSAMXP00025070756.1, ENSAMXT00025091339.1
Nucleotide Protein
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