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LOC103027561 procathepsin L-like [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103027561, updated on 23-Nov-2023

Summary

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Gene symbol
LOC103027561
Gene description
procathepsin L-like
See related
EnsemblRapid:ENSAMXG00025015548
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
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Genomic context

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See LOC103027561 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
9
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 14 NC_064421.1 (34432051..34440203, complement)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 9 NC_035905.1 (10352414..10362045)

Chromosome 14 - NC_064421.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125781044 Neighboring gene uncharacterized LOC111195572 Neighboring gene procathepsin L Neighboring gene procathepsin L

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis involved in protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
procathepsin L-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064421.1 Reference AstMex3_surface

    Range
    34432051..34440203 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015603051.3 → XP_015458537.2  procathepsin L-like

    UniProtKB/TrEMBL
    A0A8B9HIF7, A0A8T2LHJ9, W5KSA8
    Related
    ENSAMXP00025018344.1, ENSAMXT00025027555.1
    Conserved Domains (2) summary
    pfam00112
    Location:119 → 337
    Peptidase_C1; Papain family cysteine protease
    pfam08246
    Location:26 → 86
    Inhibitor_I29; Cathepsin propeptide inhibitor domain (I29)
Nucleotide Protein
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Molecular Biology Databases