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thrap3b thyroid hormone receptor associated protein 3b [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103026351, updated on 23-Nov-2023

Summary

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Gene symbol
thrap3b
Gene description
thyroid hormone receptor associated protein 3b
See related
EnsemblRapid:ENSAMXG00025001872
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) Unplaced Scaffold NW_026040042.1 (4683388..4732129, complement)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) Unplaced Scaffold NW_019172867.1 (240521..299305, complement)

NW_026040042.1Genomic Context describing neighboring genes Neighboring gene U7 snRNA-associated Sm-like protein LSm10 Neighboring gene protein eva-1 homolog B-like Neighboring gene organic solute carrier partner 1a Neighboring gene MAP7 domain-containing protein 1-like Neighboring gene O(6)-methylguanine-induced apoptosis 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thyroid hormone receptor-associated protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NW_026040042.1 Reference AstMex3_surface

    Range
    4683388..4732129 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022666475.2 → XP_022522196.2  thyroid hormone receptor-associated protein 3

    Related
    ENSAMXP00025002746.1, ENSAMXT00025003514.1

RNA

  1. XR_007429931.1 RNA Sequence

  2. XR_007429930.1 RNA Sequence

Nucleotide Protein
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