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si:cabz01068815.1 Solute carrier family 51 subunit beta [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103024295, updated on 6-Jun-2024

Summary

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Gene symbol
si:cabz01068815.1
Gene description
Solute carrier family 51 subunit beta
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Orthologs
zebrafish all
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Genomic context

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See si:cabz01068815.1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
6
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 16 NC_064423.1 (9310978..9326027)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 5 NC_035901.1 (1098257..1112048, complement)

Chromosome 16 - NC_064423.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125782200 Neighboring gene uncharacterized LOC125782198 Neighboring gene abhydrolase domain containing 2, acylglycerol lipase a Neighboring gene RAS-like, family 12 Neighboring gene kelch repeat and BTB domain containing 13a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bile acid and bile salt transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 51 subunit beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064423.1 Reference AstMex3_surface

    Range
    9310978..9326027
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022669477.2 → XP_022525198.2  solute carrier family 51 subunit beta

    UniProtKB/TrEMBL
    A0A8T2L5K2
Nucleotide Protein
Heading Accession and Version

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