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htr1fb 5-hydroxytryptamine (serotonin) receptor 1Fb [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103023679, updated on 11-Mar-2024

Summary

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Gene symbol
htr1fb
Gene description
5-hydroxytryptamine (serotonin) receptor 1Fb
See related
EnsemblRapid:ENSAMXG00025031709
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 21
Exon count:
2
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 21 NC_064428.1 (29576007..29585923)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 12 NC_035908.1 (8545592..8582803, complement)

Chromosome 21 - NC_064428.1Genomic Context describing neighboring genes Neighboring gene cAMP responsive element binding protein 1a Neighboring gene charged multivesicular body protein 2Bb Neighboring gene claudin g Neighboring gene zinc finger protein 654

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled serotonin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in adenylate cyclase-activating adrenergic receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
5-hydroxytryptamine receptor 1F

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064428.1 Reference AstMex3_surface

    Range
    29576007..29585923
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022674658.2 → XP_022530379.1  5-hydroxytryptamine receptor 1F

    UniProtKB/TrEMBL
    A0A8B9GVV8, W5LS47
    Related
    ENSAMXP00025051598.1, ENSAMXT00025066502.1
    Conserved Domains (2) summary
    cd14964
    Location:25 → 51
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:24 → 358
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
Nucleotide Protein
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Molecular Biology Databases