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pigt phosphatidylinositol glycan anchor biosynthesis, class T [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103021451, updated on 3-Apr-2024

Summary

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Gene symbol
pigt
Gene description
phosphatidylinositol glycan anchor biosynthesis, class T
See related
EnsemblRapid:ENSAMXG00025023903
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 13
Exon count:
12
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 13 NC_064420.1 (28992199..29003311)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) Unplaced Scaffold NW_019172787.1 (53642..64705)

Chromosome 13 - NC_064420.1Genomic Context describing neighboring genes Neighboring gene synaptonemal complex protein 2 Neighboring gene phosphatase and actin regulator 3a Neighboring gene WAP four-disulfide core domain 2 Neighboring gene sorting nexin family member 21 Neighboring gene HAUS augmin like complex subunit 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in attachment of GPI anchor to protein IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of GPI-anchor transamidase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI transamidase component PIG-T

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064420.1 Reference AstMex3_surface

    Range
    28992199..29003311
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022664574.2 → XP_022520295.1  GPI transamidase component PIG-T isoform X1

    UniProtKB/TrEMBL
    A0A8T2LBR6, W5K5A8
    Related
    ENSAMXP00025037750.1, ENSAMXT00025049204.1
    Conserved Domains (1) summary
    pfam04113
    Location:76 → 607
    Gpi16; Gpi16 subunit, GPI transamidase component

  2. XM_049486341.1 → XP_049342298.1  GPI transamidase component PIG-T isoform X2

    Related
    ENSAMXP00025037629.1, ENSAMXT00025049066.1
Nucleotide Protein
Heading Accession and Version

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