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RNF20 ring finger protein 20 [ Balaenoptera acutorostrata (minke whale) ]

Gene ID: 103008729, updated on 11-Mar-2024

Summary

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Gene symbol
RNF20
Gene description
ring finger protein 20
Gene type
protein coding
RefSeq status
MODEL
Organism
Balaenoptera acutorostrata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2023_06 current mBalAcu1.1 (GCF_949987535.1) 6 NC_080069.1 (94612457..94640636)
101 previous assembly BalAcu1.0 (GCF_000493695.1) Unplaced Scaffold NW_006734123.1 (7395340..7422751)

Chromosome 6 - NC_080069.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC103008531 Neighboring gene post-GPI attachment to proteins GalNAc transferase 4 Neighboring gene glutamate ionotropic receptor NMDA type subunit 3A Neighboring gene protein phosphatase 3 regulatory subunit B, beta Neighboring gene protein zyg-11 homolog A-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of HULC complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase BRE1A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_949987535.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mBalAcu1.1

Genomic

  1. NC_080069.1 Reference mBalAcu1.1

    Range
    94612457..94640636
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007197092.3 → XP_007197154.2  E3 ubiquitin-protein ligase BRE1A isoform X1

  2. XM_007197090.3 → XP_007197152.2  E3 ubiquitin-protein ligase BRE1A isoform X1

  3. XM_007197091.3 → XP_007197153.2  E3 ubiquitin-protein ligase BRE1A isoform X1

  4. XM_057548991.1 → XP_057404974.1  E3 ubiquitin-protein ligase BRE1A isoform X2

Nucleotide Protein
Heading Accession and Version

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