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EDAR ectodysplasin A receptor [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102945313, updated on 10-Mar-2024

Summary

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Gene symbol
EDAR
Gene description
ectodysplasin A receptor
Locus tag
UY3_02135
See related
EnsemblRapid:ENSCMYG00015014108
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See EDAR in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 1 NC_057849.1 (111051548..111154160)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 1 NC_051241.1 (111031285..111154171)

Chromosome 1 - NC_057849.1Genomic Context describing neighboring genes Neighboring gene SH3 domain containing ring finger 3 Neighboring gene uncharacterized LOC122463859 Neighboring gene uncharacterized LOC122463860 Neighboring gene coiled-coil domain containing 138

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of JNK cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tumor necrosis factor receptor superfamily member EDAR
Names
Tumor necrosis factor receptor superfamily member EDAR

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057849.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    111051548..111154160
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043536204.1 → XP_043392139.1  tumor necrosis factor receptor superfamily member EDAR

    Related
    ENSCMYP00015021848.1, ENSCMYT00015026445.1
    Conserved Domains (2) summary
    cd13421
    Location:27 → 162
    TNFRSF_EDAR; Tumor necrosis factor receptor superfamily member ectodysplasin A receptor (EDAR)
    cl14633
    Location:366 → 440
    DD; Death Domain Superfamily of protein-protein interaction domains
Nucleotide Protein
Heading Accession and Version

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