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MIR7515HG MIR7515 host gene [ Homo sapiens (human) ]

Gene ID: 102800314, updated on 10-Oct-2023

Summary

Official Symbol
MIR7515HGprovided by HGNC
Official Full Name
MIR7515 host geneprovided by HGNC
Primary source
HGNC:HGNC:49838
See related
Ensembl:ENSG00000236172 AllianceGenome:HGNC:49838
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 8.8) See more
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Genomic context

Location:
2p25.2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (6649107..6650519, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (6670653..6672065, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (6789239..6790651, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107985845 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr2:6677962-6679161 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr2:6696453-6697652 Neighboring gene long intergenic non-protein coding RNA 1246 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:6779905-6780508 Neighboring gene microRNA 7515 Neighboring gene long intergenic non-protein coding RNA 487 Neighboring gene uncharacterized LOC105373404 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr2:6913298-6914497

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • MIR7515 host gene (non-protein coding)
  • lncRNA LOC102800314

Clone Names

  • AC097517.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110497.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC097517, BX119852, DB061664
    Related
    ENST00000415657.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    6649107..6650519 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    6670653..6672065 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)