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zcchc4 zinc finger, CCHC domain containing 4 [ Neolamprologus brichardi ]

Gene ID: 102790447, updated on 10-Mar-2024

Summary

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Gene symbol
zcchc4
Gene description
zinc finger, CCHC domain containing 4
See related
Ensembl:ENSNBRG00000000710
Gene type
protein coding
RefSeq status
MODEL
Organism
Neolamprologus brichardi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Lamprologini; Neolamprologus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current NeoBri1.0 (GCF_000239395.1) Unplaced Scaffold NW_006272261.1 (172723..184752)

NW_006272261.1Genomic Context describing neighboring genes Neighboring gene actin filament associated protein 1 Neighboring gene actin binding LIM protein family, member 2 Neighboring gene nuclear factor 7, ovary Neighboring gene phosphodiesterase 5A, cGMP-specific, b Neighboring gene MAD2 mitotic arrest deficient-like 1 (yeast)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006272261 Unplaced Scaffold Reference NeoBri1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables rRNA (adenine-N6-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rRNA N6-adenosine-methyltransferase ZCCHC4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neolamprologus brichardi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NeoBri1.0 Primary Assembly

Genomic

  1. NW_006272261.1 Reference NeoBri1.0 Primary Assembly

    Range
    172723..184752
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006808998.2 → XP_006809061.1  rRNA N6-adenosine-methyltransferase ZCCHC4

    UniProtKB/TrEMBL
    A0A3Q4M2D6
    Related
    ENSNBRP00000000844.1, ENSNBRT00000000893.1
    Conserved Domains (2) summary
    pfam06839
    Location:25 → 69
    zf-GRF; GRF zinc finger
    pfam10237
    Location:158 → 291
    N6-adenineMlase; Probable N6-adenine methyltransferase
Nucleotide Protein
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