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ELDR EGFR long non-coding downstream RNA [ Homo sapiens (human) ]

Gene ID: 102725541, updated on 10-Oct-2023

Summary

Official Symbol
ELDRprovided by HGNC
Official Full Name
EGFR long non-coding downstream RNAprovided by HGNC
Primary source
HGNC:HGNC:49511
See related
MIM:618217; AllianceGenome:HGNC:49511
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
Fabl; LINC01156
Summary
Predicted to act upstream of or within regulation of gene expression and response to wounding. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
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Genomic context

See ELDR in Genome Data Viewer
Location:
7p11.2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (55238436..55255635, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (55399005..55416204, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (55306129..55323328, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105375284 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:55087710-55088384 Neighboring gene epidermal growth factor receptor Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:55134605-55135181 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr7:55141370-55142569 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26009 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26010 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:55198912-55199819 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr7:55200333-55201532 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26011 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:55214270-55214808 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:55219798-55220606 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr7:55223847-55225046 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:55248893-55249512 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:55249513-55250132 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:55253294-55254067 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:55259777-55260662 Neighboring gene EGFR antisense RNA 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:55281927-55282427 Neighboring gene OCT4 hESC enhancer GRCh37_chr7:55304767-55305286 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr7:55307850-55309049 Neighboring gene solute carrier family 19 member 3 pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18186 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18187 Neighboring gene calmodulin 1 pseudogene 2 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:55366838-55367536 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:55378490-55378674 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:55379236-55379736 Neighboring gene RNA exonuclease 1 homolog

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110426.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    DB084610

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    55238436..55255635 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    55399005..55416204 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)