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SPINT1-AS1 SPINT1 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 102724362, updated on 23-Nov-2021

Summary

Official Symbol
SPINT1-AS1provided by HGNC
Official Full Name
SPINT1 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:53162
See related
Ensembl:ENSG00000261183
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in colon (RPKM 9.8), kidney (RPKM 8.3) and 16 other tissues See more
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Genomic context

See SPINT1-AS1 in Genome Data Viewer
Location:
15q15.1
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 15 NC_000015.10 (40835993..40844524, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (41128191..41136722, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene DnaJ heat shock protein family (Hsp40) member C17 Neighboring gene zinc finger FYVE-type containing 19 Neighboring gene protein phosphatase 1 regulatory inhibitor subunit 14D Neighboring gene Sharpr-MPRA regulatory region 7770 Neighboring gene serine peptidase inhibitor, Kunitz type 1 Neighboring gene ras homolog family member V Neighboring gene VPS18 core subunit of CORVET and HOPS complexes

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_146466.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC012476, BU687826
    Related
    ENST00000564302.5
  2. NR_146467.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC012476, BF508769
  3. NR_146468.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AA855050, AC012476

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p13 Primary Assembly

    Range
    40835993..40844524 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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