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Gm16876 predicted gene, 16876 [ Mus musculus (house mouse) ]

Gene ID: 102638151, updated on 17-Aug-2024

Summary

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Official Symbol
Gm16876provided by MGI
Official Full Name
predicted gene, 16876provided by MGI
Primary source
MGI:MGI:4439800
See related
AllianceGenome:MGI:4439800
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm16876 in Genome Data Viewer
Location:
12 D3; 12 45.02 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (91645229..91656462)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (91681798..91689636)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene general transcription factor II A, 1 Neighboring gene STARR-seq mESC enhancer starr_32930 Neighboring gene STARR-seq mESC enhancer starr_32931 Neighboring gene predicted gene, 25776 Neighboring gene STARR-seq mESC enhancer starr_32932 Neighboring gene STARR-seq mESC enhancer starr_32934 Neighboring gene stonin 2 Neighboring gene VISTA enhancer mm815 Neighboring gene ragulator complex protein LAMTOR2 pseudogene Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:92984674-92984783 Neighboring gene STARR-positive B cell enhancer ABC_E8496 Neighboring gene predicted gene, 34718 Neighboring gene STARR-positive B cell enhancer ABC_E5346 Neighboring gene sel-1 suppressor of lin-12-like (C. elegans) Neighboring gene STARR-positive B cell enhancer ABC_E308

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    91645229..91656462
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_872911.4 RNA Sequence

  2. XR_001780665.3 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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