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Gm17171 predicted gene 17171 [ Mus musculus (house mouse) ]

Gene ID: 102637381, updated on 17-Aug-2024

Summary

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Official Symbol
Gm17171provided by MGI
Official Full Name
predicted gene 17171provided by MGI
Primary source
MGI:MGI:4937998
See related
AllianceGenome:MGI:4937998
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm17171 in Genome Data Viewer
Location:
2 A3; 2 14.54 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (20302518..20338070, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (20298474..20333259, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene enhancer trap locus 4 Neighboring gene mitochondrial ribosomal protein S5 pseudogene Neighboring gene predicted gene, 23970 Neighboring gene STARR-seq mESC enhancer starr_03841 Neighboring gene STARR-seq mESC enhancer starr_03842 Neighboring gene predicted gene, 54104 Neighboring gene STARR-seq mESC enhancer starr_03843 Neighboring gene STARR-seq mESC enhancer starr_03846 Neighboring gene CRISPRi-validated Etl4 enhancer cluster Neighboring gene STARR-seq mESC enhancer starr_03863 Neighboring gene STARR-seq mESC enhancer starr_03867 Neighboring gene STARR-seq mESC enhancer starr_03870 Neighboring gene Rho GTPase activating protein 21 Neighboring gene STARR-positive B cell enhancer mm9_chr2:20885831-20886131 Neighboring gene predicted gene 13375

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    20302518..20338070 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_003953996.2 RNA Sequence

  2. XR_003953995.2 RNA Sequence

  3. XR_003953994.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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