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Rpl36a-ps18 ribosomal protein L36A, pseudogene 18 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102556473, updated on 29-Feb-2024

Summary

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Official Symbol
Rpl36a-ps18provided by RGD
Official Full Name
ribosomal protein L36A, pseudogene 18provided by RGD
Primary source
RGD:7507440
See related
AllianceGenome:RGD:7507440
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Restricted expression toward (RPKM 7.3) See more
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Genomic context

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Location:
7q13
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (31586389..31608361)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (29695020..29709955)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (36157017..36165754)

Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108351432 Neighboring gene large ribosomal subunit protein eL42-like Neighboring gene uncharacterized LOC134479664 Neighboring gene death domain-containing protein CRADD-like Neighboring gene ribosomal protein L39, pseudogene 13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086025.1 Reference GRCr8

    Range
    31586389..31608361
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_010053685.1 RNA Sequence

  2. XR_010053680.1 RNA Sequence

  3. XR_010053681.1 RNA Sequence

  4. XR_010053678.1 RNA Sequence

  5. XR_010053679.1 RNA Sequence

  6. XR_010053684.1 RNA Sequence

  7. XR_010053682.1 RNA Sequence

  8. XR_010053683.1 RNA Sequence

  9. XR_010053686.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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