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TMCO3 transmembrane and coiled-coil domains 3 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102405609, updated on 21-Jul-2018

Summary

Gene symbol
TMCO3
Gene description
transmembrane and coiled-coil domains 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs

Genomic context

See TMCO3 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
15
Annotation release Status Assembly Chr Location
101 current ASM312139v1 (GCF_003121395.1) 13 NC_037557.1 (417559..439359, complement)
100 previous assembly UMD_CASPUR_WB_2.0 (GCF_000471725.1) Unplaced Scaffold NW_005785701.1 (982440..1002321, complement)

Chromosome 13 - NC_037557.1Genomic Context describing neighboring genes Neighboring gene ATPase H+/K+ transporting subunit beta Neighboring gene transcription factor Dp-1 Neighboring gene defective in cullin neddylation 1 domain containing 2 Neighboring gene protein ADP-ribosylarginine hydrolase-like protein 1

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
transmembrane and coiled-coil domain-containing protein 3

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM312139v1 Primary Assembly

Genomic

  1. NC_037557.1 Reference ASM312139v1 Primary Assembly

    Range
    417559..439359 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025262539.1XP_025118324.1  transmembrane and coiled-coil domain-containing protein 3 isoform X6

    Conserved Domains (2) summary
    cl01133
    Location:274353
    Na_H_Exchanger; Sodium/hydrogen exchanger family
    cl28015
    Location:67200
    PspA_IM30; PspA/IM30 family
  2. XM_025262540.1XP_025118325.1  transmembrane and coiled-coil domain-containing protein 3 isoform X7

    Conserved Domains (3) summary
    cl01133
    Location:274353
    Na_H_Exchanger; Sodium/hydrogen exchanger family
    cl28015
    Location:67200
    PspA_IM30; PspA/IM30 family
    cl28033
    Location:345594
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  3. XM_025262538.1XP_025118323.1  transmembrane and coiled-coil domain-containing protein 3 isoform X5

    Conserved Domains (2) summary
    pfam00999
    Location:274511
    Na_H_Exchanger; Sodium/hydrogen exchanger family
    cl28015
    Location:67200
    PspA_IM30; PspA/IM30 family
  4. XM_025262534.1XP_025118319.1  transmembrane and coiled-coil domain-containing protein 3 isoform X1

    Conserved Domains (2) summary
    pfam00999
    Location:274643
    Na_H_Exchanger; Sodium/hydrogen exchanger family
    cl28015
    Location:67200
    PspA_IM30; PspA/IM30 family
  5. XM_025262533.1XP_025118318.1  transmembrane and coiled-coil domain-containing protein 3 isoform X1

    Conserved Domains (2) summary
    pfam00999
    Location:274643
    Na_H_Exchanger; Sodium/hydrogen exchanger family
    cl28015
    Location:67200
    PspA_IM30; PspA/IM30 family
  6. XM_025262536.1XP_025118321.1  transmembrane and coiled-coil domain-containing protein 3 isoform X3

    Conserved Domains (2) summary
    pfam00999
    Location:274573
    Na_H_Exchanger; Sodium/hydrogen exchanger family
    cl28015
    Location:67200
    PspA_IM30; PspA/IM30 family
  7. XM_025262541.1XP_025118326.1  transmembrane and coiled-coil domain-containing protein 3 isoform X8

    Conserved Domains (3) summary
    cl01133
    Location:274353
    Na_H_Exchanger; Sodium/hydrogen exchanger family
    cl27975
    Location:352528
    EBV-NA3; Epstein-Barr virus nuclear antigen 3 (EBNA-3)
    cl28015
    Location:67200
    PspA_IM30; PspA/IM30 family
  8. XM_025262535.1XP_025118320.1  transmembrane and coiled-coil domain-containing protein 3 isoform X2

    Conserved Domains (2) summary
    pfam00999
    Location:274653
    Na_H_Exchanger; Sodium/hydrogen exchanger family
    cl25732
    Location:60271
    SMC_N; RecF/RecN/SMC N terminal domain
  9. XM_025262537.1XP_025118322.1  transmembrane and coiled-coil domain-containing protein 3 isoform X4

    Conserved Domains (2) summary
    pfam00999
    Location:274573
    Na_H_Exchanger; Sodium/hydrogen exchanger family
    cl28015
    Location:67200
    PspA_IM30; PspA/IM30 family
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