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GABRP gamma-aminobutyric acid type A receptor subunit pi [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102350988, updated on 25-Apr-2024

Summary

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Gene symbol
GABRP
Gene description
gamma-aminobutyric acid type A receptor subunit pi
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819812.1 (408428..622621)

NW_005819812.1Genomic Context describing neighboring genes Neighboring gene putative ammonium transporter 1 Neighboring gene potassium voltage-gated channel interacting protein 1 Neighboring gene potassium calcium-activated channel subfamily M regulatory beta subunit 1 Neighboring gene kazal-type serine protease inhibitor domain-containing protein 1-like Neighboring gene RAN binding protein 17 Neighboring gene uncharacterized LOC106704702

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005819812.1 Unplaced Scaffold Reference LatCha1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables extracellular ligand-gated monoatomic ion channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gamma-aminobutyric acid receptor subunit pi
Names
gamma-aminobutyric acid type A receptor pi subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Latimeria chalumnae Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LatCha1 Primary Assembly

Genomic

  1. NW_005819812.1 Reference LatCha1 Primary Assembly

    Range
    408428..622621
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006002444.1 → XP_006002506.1  gamma-aminobutyric acid receptor subunit pi

    Conserved Domains (3) summary
    TIGR00860
    Location:537 → 971
    LIC; Cation transporter family protein
    pfam02931
    Location:575 → 773
    Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain
    pfam02932
    Location:780 → 968
    Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region
Nucleotide Protein
Heading Accession and Version

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