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MINDY4 MINDY lysine 48 deubiquitinase 4 [ Pseudopodoces humilis (Tibetan ground-tit) ]

Gene ID: 102110343, updated on 10-Mar-2024

Summary

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Gene symbol
MINDY4
Gene description
MINDY lysine 48 deubiquitinase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudopodoces humilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Pseudopodoces
Also known as
FAM188B
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
101 current PseHum1.0 (GCF_000331425.1) Unplaced Scaffold NW_005087593.1 (3971458..4037464)

NW_005087593.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 585A-like Neighboring gene corticotropin releasing hormone receptor 2 Neighboring gene aquaporin 1 (Colton blood group) Neighboring gene growth hormone releasing hormone receptor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005087593.1 Unplaced Scaffold Reference PseHum1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K48-linked deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein K48-linked deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein FAM188B
Names
family with sequence similarity 188 member B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudopodoces humilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PseHum1.0 Primary Assembly

Genomic

  1. NW_005087593.1 Reference PseHum1.0 Primary Assembly

    Range
    3971458..4037464
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014256785.1 → XP_014112260.1  protein FAM188B isoform X2

    Conserved Domains (1) summary
    pfam13898
    Location:405 → 741
    DUF4205; Domain of unknown function (DUF4205)

  2. XM_005527780.2 → XP_005527837.1  protein FAM188B isoform X1

    Conserved Domains (1) summary
    pfam13898
    Location:413 → 749
    DUF4205; Domain of unknown function (DUF4205)

  3. XM_014256786.1 → XP_014112261.1  protein FAM188B isoform X3

    Conserved Domains (1) summary
    pfam13898
    Location:413 → 715
    DUF4205; Domain of unknown function (DUF4205)

  4. XM_014256788.1 → XP_014112263.1  protein FAM188B isoform X5

    Conserved Domains (1) summary
    pfam13898
    Location:413 → 664
    DUF4205; Domain of unknown function (DUF4205)

  5. XM_014256787.1 → XP_014112262.1  protein FAM188B isoform X4

    Conserved Domains (1) summary
    pfam13898
    Location:373 → 709
    DUF4205; Domain of unknown function (DUF4205)
Nucleotide Protein
Heading Accession and Version

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