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ERCC5 ERCC excision repair 5, endonuclease [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102031837, updated on 3-Aug-2024

Summary

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Gene symbol
ERCC5
Gene description
ERCC excision repair 5, endonuclease
See related
Ensembl:ENSGFOG00000000335
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054342.1 (129958..144888)

NW_005054342.1Genomic Context describing neighboring genes Neighboring gene protein O-glucosyltransferase 2 Neighboring gene basic, immunoglobulin-like variable motif containing Neighboring gene protein-lysine methyltransferase METTL21E-like Neighboring gene solute carrier family 10 member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054342 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA repair protein complementing XP-G cells
Names
excision repair cross-complementing rodent repair deficiency, complementation group 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054342.1 Reference GeoFor_1.0

    Range
    129958..144888
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031058358.1 → XP_030914218.1  DNA repair protein complementing XP-G cells isoform X1

    UniProtKB/TrEMBL
    A0A6I9HKF4
    Related
    ENSGFOP00000000445.1, ENSGFOT00000000458.1
    Conserved Domains (1) summary
    TIGR00600
    Location:1 → 1047
    rad2; DNA excision repair protein (rad2)

  2. XM_031058359.1 → XP_030914219.1  DNA repair protein complementing XP-G cells isoform X2

    UniProtKB/TrEMBL
    A0A8N5ELF8
    Conserved Domains (1) summary
    TIGR00600
    Location:1 → 1040
    rad2; DNA excision repair protein (rad2)

  3. XM_005422671.2 → XP_005422728.1  DNA repair protein complementing XP-G cells isoform X1

    UniProtKB/TrEMBL
    A0A6I9HKF4
    Conserved Domains (1) summary
    TIGR00600
    Location:1 → 1047
    rad2; DNA excision repair protein (rad2)
Nucleotide Protein
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